PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G28490.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family TCP
Protein Properties Length: 372aa    MW: 39786 Da    PI: 7.1206
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G28490.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP156.51.5e-481002581136
              TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 
                      aa++kdrhski+T++g+RdRR+Rls+++a++fF+Lqd+LGfdk+skt++WLl+++k+ai e++++  +++s c e++sss s++ + ++     
  OPUNC03G28490.1 100 AAARKDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREIMSD--DASSVCeEDGSSSLSVDGKPHSspaeg 191
                      589**************************************************************..666678877777777773333345667 PP

              TCP  89 ...................kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136
                                         k +++aa++k++++ a+++  ++kesrakar+rarert+ek+r+++++
  OPUNC03G28490.1 192 gaagdhkgahshsdgkkpaKPRRAAATPKPPRRLANAHPVPDKESRAKARERARERTKEKNRMRWVT 258
                      7777777788888899997777777799************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.8E-45102254IPR005333Transcription factor, TCP
PROSITE profilePS5136934.132103161IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137012.264234251IPR017888CYC/TB1, R domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000032Biological Processregulation of secondary shoot formation
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MDIPLYQQLQ LTPPSPKPDH HHSTFFYYHH PPSSPSFPSF PSPAAAMIAS PSPLMHPFMD  60
LELEPQQQQP PPEDGAGGNN EYGGQGVDAG AIGLDGAAAA AARKDRHSKI STAGGMRDRR  120
MRLSLDVARK FFALQDMLGF DKASKTVQWL LNMSKAAIRE IMSDDASSVC EEDGSSSLSV  180
DGKPHSSPAE GGAAGDHKGA HSHSDGKKPA KPRRAAATPK PPRRLANAHP VPDKESRAKA  240
RERARERTKE KNRMRWVTLA SAISVEAATA AAAAAAAVED RSPTSPSNNL NHSSSTNLVS  300
TELEDGSSST RHNGGDGRMQ EISVASEASD VIMAFANGGA YGDSGSYYLQ QQHQQDQWEL  360
GGVVFANSRH YC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB4915580.0AB491558.1 Oryza punctata tb1 gene for teosinte branched 1, complete cds, strain: W1514.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015630237.10.0PREDICTED: transcription factor TEOSINTE BRANCHED 1
SwissprotQ93WI25e-95TB1_MAIZE; Transcription factor TEOSINTE BRANCHED 1
TrEMBLA0A0E0KI060.0A0A0E0KI06_ORYPU; Uncharacterized protein
STRINGLOC_Os03g49880.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72533651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.18e-23TCP domain protein 12